Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
PRIM2P49643 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRIM2P49643 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.77■□□□□ 0.28
PRIM2P49643 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
PRIM2P49643 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.77■□□□□ 0.27
PRIM2P49643 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PRIM2P49643 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.77■□□□□ 0.27
PRIM2P49643 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PRIM2P49643 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.77■□□□□ 0.27
PRIM2P49643 AL138688.1-201ENST00000624851 1594 ntBASIC16.77■□□□□ 0.27
PRIM2P49643 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRIM2P49643 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.76■□□□□ 0.27
PRIM2P49643 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.76■□□□□ 0.27
PRIM2P49643 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.76■□□□□ 0.27
PRIM2P49643 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
PRIM2P49643 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.76■□□□□ 0.27
PRIM2P49643 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRIM2P49643 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.76■□□□□ 0.27
PRIM2P49643 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 AC112907.2-201ENST00000448639 330 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 AC104076.2-201ENST00000448912 469 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 KRT18P38-201ENST00000449496 1282 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.76■□□□□ 0.27
PRIM2P49643 AP003733.1-201ENST00000491725 852 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
PRIM2P49643 LINC01238-205ENST00000567549 1107 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.76■□□□□ 0.27
PRIM2P49643 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.76■□□□□ 0.27
PRIM2P49643 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRIM2P49643 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRIM2P49643 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.76■□□□□ 0.27
PRIM2P49643 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRIM2P49643 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 MIR662-201ENST00000384847 95 ntBASIC16.75■□□□□ 0.27
PRIM2P49643 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.75■□□□□ 0.27
PRIM2P49643 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 AC004263.2-201ENST00000617183 678 ntBASIC16.75■□□□□ 0.27
PRIM2P49643 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PRIM2P49643 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
PRIM2P49643 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRIM2P49643 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms