Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC6A4P31645 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 MYCLP1-201ENST00000372451 1075 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC6A4P31645 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC6A4P31645 AL590627.1-203ENST00000421194 1026 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC6A4P31645 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC6A4P31645 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.02■□□□□ 0.48
SLC6A4P31645 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SLC6A4P31645 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 AC120114.3-201ENST00000611923 658 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 AC116407.3-201ENST00000623905 1129 ntBASIC18.02■□□□□ 0.48
SLC6A4P31645 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A4P31645 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SLC6A4P31645 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC6A4P31645 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC6A4P31645 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A4P31645 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
SLC6A4P31645 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC6A4P31645 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC6A4P31645 AC134043.2-201ENST00000624206 2238 ntBASIC18.01■□□□□ 0.47
SLC6A4P31645 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC6A4P31645 SIGLEC30P-201ENST00000455569 941 ntBASIC18.01■□□□□ 0.47
SLC6A4P31645 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC6A4P31645 AC139887.3-201ENST00000568585 713 ntBASIC18.01■□□□□ 0.47
SLC6A4P31645 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC6A4P31645 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 BX640515.1-201ENST00000617215 977 ntBASIC18.01■□□□□ 0.47
SLC6A4P31645 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 AC008735.5-201ENST00000623544 497 ntBASIC18.01■□□□□ 0.47
SLC6A4P31645 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A4P31645 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A4P31645 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A4P31645 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18■□□□□ 0.47
SLC6A4P31645 AL022342.1-201ENST00000400363 863 ntBASIC18■□□□□ 0.47
SLC6A4P31645 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18■□□□□ 0.47
SLC6A4P31645 LAGE3P1-201ENST00000425356 484 ntBASIC18■□□□□ 0.47
SLC6A4P31645 SLC25A1P1-201ENST00000528351 927 ntBASIC18■□□□□ 0.47
SLC6A4P31645 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 NME4-212ENST00000621774 904 ntTSL 3 BASIC18■□□□□ 0.47
SLC6A4P31645 HLA-J-201ENST00000462773 1622 ntBASIC18■□□□□ 0.47
SLC6A4P31645 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A4P31645 AP002414.3-201ENST00000589352 1468 ntBASIC18■□□□□ 0.47
SLC6A4P31645 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SLC6A4P31645 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms