Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC8P31273 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC8P31273 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC8P31273 ABALON-201ENST00000629058 1903 ntBASIC19.04■□□□□ 0.64
HOXC8P31273 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 AL121761.2-201ENST00000598007 1648 ntBASIC19.03■□□□□ 0.64
HOXC8P31273 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC8P31273 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.03■□□□□ 0.64
HOXC8P31273 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXC8P31273 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXC8P31273 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC8P31273 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 AC105339.1-204ENST00000636249 355 ntBASIC19.03■□□□□ 0.64
HOXC8P31273 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HOXC8P31273 AC004408.2-201ENST00000623613 2777 ntBASIC19.03■□□□□ 0.64
HOXC8P31273 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC8P31273 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HOXC8P31273 AC104581.1-202ENST00000635932 2618 ntBASIC19.03■□□□□ 0.64
HOXC8P31273 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC8P31273 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 AL645939.2-201ENST00000427340 991 ntBASIC19.02■□□□□ 0.64
HOXC8P31273 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 AC107918.2-201ENST00000530817 355 ntBASIC19.02■□□□□ 0.64
HOXC8P31273 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.02■□□□□ 0.64
HOXC8P31273 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HOXC8P31273 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC8P31273 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.02■□□□□ 0.64
HOXC8P31273 REXO1L3P-201ENST00000622202 1288 ntBASIC19.02■□□□□ 0.64
HOXC8P31273 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 AC092919.2-201ENST00000623631 1645 ntBASIC19.02■□□□□ 0.64
HOXC8P31273 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC8P31273 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC8P31273 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
HOXC8P31273 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC8P31273 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC8P31273 AC129492.6-201ENST00000611383 1305 ntBASIC19.01■□□□□ 0.63
HOXC8P31273 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC8P31273 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC8P31273 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC8P31273 AL139400.1-201ENST00000366220 510 ntBASIC19.01■□□□□ 0.63
HOXC8P31273 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
HOXC8P31273 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC8P31273 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXC8P31273 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC8P31273 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HOXC8P31273 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXC8P31273 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC8P31273 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms