Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
HOXA11P31270 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HOXA11P31270 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXA11P31270 RNA5SP416-201ENST00000516838 111 ntBASIC18.93■□□□□ 0.62
HOXA11P31270 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA11P31270 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA11P31270 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA11P31270 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.93■□□□□ 0.62
HOXA11P31270 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXA11P31270 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXA11P31270 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HOXA11P31270 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
HOXA11P31270 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXA11P31270 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXA11P31270 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXA11P31270 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXA11P31270 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HOXA11P31270 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 PRSS29P-201ENST00000440800 595 ntBASIC18.92■□□□□ 0.62
HOXA11P31270 VN2R19P-201ENST00000442399 1052 ntBASIC18.92■□□□□ 0.62
HOXA11P31270 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 AL590787.1-201ENST00000568856 1315 ntBASIC18.92■□□□□ 0.62
HOXA11P31270 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 AL355312.1-201ENST00000407115 2176 ntBASIC18.92■□□□□ 0.62
HOXA11P31270 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXA11P31270 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXA11P31270 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HOXA11P31270 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA11P31270 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HOXA11P31270 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA11P31270 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXA11P31270 AP002414.1-201ENST00000391405 1147 ntBASIC18.91■□□□□ 0.62
HOXA11P31270 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.91■□□□□ 0.62
HOXA11P31270 HCG4B-203ENST00000450128 991 ntBASIC18.91■□□□□ 0.62
HOXA11P31270 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.91■□□□□ 0.62
HOXA11P31270 AC040169.1-201ENST00000565382 521 ntBASIC18.91■□□□□ 0.62
HOXA11P31270 OR7E47P-204ENST00000575924 449 ntBASIC18.91■□□□□ 0.62
HOXA11P31270 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.91■□□□□ 0.62
HOXA11P31270 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA11P31270 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA11P31270 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA11P31270 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA11P31270 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA11P31270 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXA11P31270 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXA11P31270 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXA11P31270 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA11P31270 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXA11P31270 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HOXA11P31270 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 AC008764.6-201ENST00000595909 2069 ntBASIC18.9■□□□□ 0.62
HOXA11P31270 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXA11P31270 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXA11P31270 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXA11P31270 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.9■□□□□ 0.62
HOXA11P31270 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms