Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 C4BPB-204ENST00000391923 949 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.771e-7■■■□□ 16.3
RPS3P23396 CNDP2-207ENST00000579583 510 ntTSL 410.22□□□□□ -0.771e-7■■■□□ 16.3
RPS3P23396 CPVL-208ENST00000449801 528 ntTSL 410.04□□□□□ -0.81e-7■■■□□ 16.3
RPS3P23396 EIF2B4-208ENST00000475582 4293 ntTSL 59.93□□□□□ -0.821e-7■■■□□ 16.3
RPS3P23396 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.86□□□□□ -0.831e-7■■■□□ 16.3
RPS3P23396 G3BP1-205ENST00000518726 869 ntTSL 1 (best)9.63□□□□□ -0.875e-14■■■□□ 16.3
RPS3P23396 CNDP2-218ENST00000582620 525 ntTSL 59.47□□□□□ -0.891e-7■■■□□ 16.3
RPS3P23396 C4BPB-205ENST00000452902 742 ntTSL 39.32□□□□□ -0.921e-7■■■□□ 16.3
RPS3P23396 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.951e-7■■■□□ 16.3
RPS3P23396 HSD17B2-202ENST00000563491 487 ntTSL 39.1□□□□□ -0.951e-7■■■□□ 16.3
RPS3P23396 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.961e-7■■■□□ 16.3
RPS3P23396 HSD17B2-201ENST00000199936 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.961e-7■■■□□ 16.3
RPS3P23396 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.091e-7■■■□□ 16.3
RPS3P23396 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.11e-7■■■□□ 16.3
RPS3P23396 EFTUD2-221ENST00000591856 366 ntTSL 38.03□□□□□ -1.121e-7■■■□□ 16.3
RPS3P23396 HSD17B2-203ENST00000566213 551 ntTSL 37.82□□□□□ -1.161e-7■■■□□ 16.3
RPS3P23396 YTHDF2-202ENST00000468863 687 ntTSL 37.74□□□□□ -1.171e-7■■■□□ 16.3
RPS3P23396 CLDN1-202ENST00000490800 432 ntTSL 27.4□□□□□ -1.221e-7■■■□□ 16.3
RPS3P23396 YTHDF2-204ENST00000475796 358 ntTSL 27.21□□□□□ -1.261e-7■■■□□ 16.3
RPS3P23396 ABHD4-210ENST00000545034 185 ntTSL 57.2□□□□□ -1.261e-7■■■□□ 16.3
RPS3P23396 YTHDF2-205ENST00000476976 657 ntTSL 36.63□□□□□ -1.351e-7■■■□□ 16.3
RPS3P23396 C4BPB-208ENST00000492730 564 ntTSL 45.7□□□□□ -1.51e-7■■■□□ 16.3
RPS3P23396 MCCC2-204ENST00000507169 869 ntTSL 34.24□□□□□ -1.731e-7■■■□□ 16.3
RPS3P23396 MCCC2-203ENST00000505787 774 ntTSL 53.5□□□□□ -1.851e-7■■■□□ 16.3
RPS3P23396 GRB2-209ENST00000581959 359 ntTSL 33.2□□□□□ -1.91e-16■■■□□ 16.3
RPS3P23396 AKR1C3-207ENST00000603312 528 ntTSL 22.99□□□□□ -1.931e-7■■■□□ 16.3
RPS3P23396 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.3□□□□□ -2.465e-14■■■□□ 16.3
RPS3P23396 WARS-233ENST00000556660 584 ntTSL 410.14□□□□□ -0.793e-9■■■□□ 16.3
RPS3P23396 CADM1-205ENST00000536781 575 ntTSL 419.15■□□□□ 0.662e-9■■■□□ 16.3
RPS3P23396 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)13.68□□□□□ -0.225e-7■■■□□ 16.3
RPS3P23396 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.385e-7■■■□□ 16.3
RPS3P23396 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.66□□□□□ -0.385e-7■■■□□ 16.3
RPS3P23396 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC11.3□□□□□ -0.65e-7■■■□□ 16.3
RPS3P23396 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.51■■□□□ 1.198e-7■■■□□ 16.3
RPS3P23396 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.128e-7■■■□□ 16.3
RPS3P23396 EML2-208ENST00000586902 557 ntTSL 418.44■□□□□ 0.541e-9■■■□□ 16.3
RPS3P23396 EML2-214ENST00000588272 361 ntTSL 311.78□□□□□ -0.521e-9■■■□□ 16.3
RPS3P23396 FLNB-205ENST00000466455 404 ntTSL 317.41■□□□□ 0.382e-14■■■□□ 16.3
RPS3P23396 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.811e-6■■■□□ 16.3
RPS3P23396 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.271e-6■■■□□ 16.3
RPS3P23396 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■■□□ 16.3
RPS3P23396 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.11e-6■■■□□ 16.3
RPS3P23396 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.321e-6■■■□□ 16.3
RPS3P23396 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.572e-7■■■□□ 16.3
RPS3P23396 LDHA-213ENST00000535451 465 ntTSL 411.53□□□□□ -0.567e-20■■■□□ 16.3
RPS3P23396 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.28□□□□□ -1.089e-8■■■□□ 16.3
RPS3P23396 PRMT1-205ENST00000525915 298 ntTSL 33.53□□□□□ -1.842e-6■■■□□ 16.3
RPS3P23396 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.66□□□□□ -0.061e-11■■■□□ 16.3
RPS3P23396 EPRS-205ENST00000485821 598 ntTSL 35.21□□□□□ -1.586e-7■■■□□ 16.3
RPS3P23396 DIRC2-202ENST00000477647 1822 ntTSL 1 (best)26.44■■□□□ 1.824e-14■■■□□ 16.3
RPS3P23396 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.154e-14■■■□□ 16.3
RPS3P23396 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.014e-14■■■□□ 16.3
RPS3P23396 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.28□□□□□ -0.284e-14■■■□□ 16.3
RPS3P23396 ITFG1-206ENST00000563730 550 ntTSL 41.95□□□□□ -2.14e-14■■■□□ 16.3
RPS3P23396 LAMB2-207ENST00000477225 535 ntTSL 212.52□□□□□ -0.414e-9■■■□□ 16.3
RPS3P23396 CALR-204ENST00000586967 394 ntTSL 214.61□□□□□ -0.075e-80■■■□□ 16.3
RPS3P23396 PTOV1-208ENST00000597730 327 ntTSL 214.94□□□□□ -0.027e-9■■■□□ 16.3
RPS3P23396 PLOD3-212ENST00000478082 1585 ntTSL 218.24■□□□□ 0.512e-7■■■□□ 16.3
RPS3P23396 AKR1C3-211ENST00000605781 859 ntTSL 38.78□□□□□ -11e-7■■■□□ 16.3
RPS3P23396 SND1-208ENST00000470463 530 ntTSL 410.95□□□□□ -0.663e-8■■■□□ 16.3
RPS3P23396 HSPA9-207ENST00000507097 1796 ntTSL 213.7□□□□□ -0.223e-7■■■□□ 16.3
RPS3P23396 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.773e-7■■■□□ 16.3
RPS3P23396 WARS-207ENST00000553524 707 ntTSL 319.65■□□□□ 0.742e-9■■■□□ 16.3
RPS3P23396 WARS-218ENST00000554772 562 ntTSL 318.36■□□□□ 0.532e-9■■■□□ 16.3
RPS3P23396 WARS-239ENST00000557239 471 ntTSL 416.64■□□□□ 0.252e-9■■■□□ 16.3
RPS3P23396 WARS-236ENST00000556783 567 ntTSL 516.54■□□□□ 0.242e-9■■■□□ 16.3
RPS3P23396 WARS-206ENST00000553413 568 ntTSL 515.97■□□□□ 0.152e-9■■■□□ 16.3
RPS3P23396 WARS-231ENST00000556579 565 ntTSL 212.75□□□□□ -0.372e-9■■■□□ 16.3
RPS3P23396 WARS-235ENST00000556698 640 ntTSL 410.14□□□□□ -0.792e-9■■■□□ 16.3
RPS3P23396 WARS-223ENST00000555410 677 ntTSL 54.81□□□□□ -1.642e-9■■■□□ 16.3
RPS3P23396 B2M-209ENST00000560556 472 ntTSL 32.67□□□□□ -1.986e-11■■■□□ 16.3
RPS3P23396 C3-207ENST00000596238 563 ntTSL 27.04□□□□□ -1.281e-41■■■□□ 16.3
RPS3P23396 LMNA-218ENST00000502357 537 ntTSL 411.94□□□□□ -0.57e-9■■■□□ 16.3
RPS3P23396 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.13e-9■■■□□ 16.3
RPS3P23396 HSPD1-214ENST00000491249 860 ntTSL 27.24□□□□□ -1.254e-18■■■□□ 16.3
RPS3P23396 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.116e-14■■■□□ 16.3
RPS3P23396 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.246e-14■■■□□ 16.3
RPS3P23396 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.22□□□□□ -1.576e-14■■■□□ 16.3
RPS3P23396 NPM1-212ENST00000524204 640 ntTSL 23.13□□□□□ -1.913e-11■■■□□ 16.3
RPS3P23396 NOTUM-204ENST00000489218 972 ntTSL 218.52■□□□□ 0.561e-14■■■□□ 16.3
RPS3P23396 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.66■□□□□ 0.421e-7■■■□□ 16.2
RPS3P23396 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.09■□□□□ 0.331e-7■■■□□ 16.2
RPS3P23396 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.091e-7■■■□□ 16.2
RPS3P23396 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.24□□□□□ -1.251e-7■■■□□ 16.2
RPS3P23396 DGCR2-203ENST00000467659 2459 ntTSL 516.99■□□□□ 0.311e-6■■■□□ 16.2
RPS3P23396 MOB1A-203ENST00000488006 482 ntTSL 315.09■□□□□ 0.013e-11■■■□□ 16.2
RPS3P23396 MOB1A-204ENST00000494600 493 ntTSL 210.14□□□□□ -0.793e-11■■■□□ 16.2
RPS3P23396 GALNT2-205ENST00000494106 692 ntTSL 513.28□□□□□ -0.282e-6■■■□□ 16.2
RPS3P23396 TALDO1-202ENST00000528070 856 ntTSL 517.52■□□□□ 0.46e-9■■■□□ 16.2
RPS3P23396 TALDO1-205ENST00000530440 710 ntTSL 310.4□□□□□ -0.746e-9■■■□□ 16.2
RPS3P23396 SLC3A2-214ENST00000539507 534 ntTSL 36.3□□□□□ -1.44e-7■■■□□ 16.2
RPS3P23396 HMGCR-208ENST00000509431 421 ntTSL 212.42□□□□□ -0.422e-10■■■□□ 16.2
RPS3P23396 EIF1-206ENST00000586699 572 ntTSL 23.43□□□□□ -1.863e-18■■■□□ 16.2
RPS3P23396 RPS15A-209ENST00000573554 606 ntTSL 1 (best)16.15■□□□□ 0.181e-10■■■□□ 16.2
RPS3P23396 SQSTM1-208ENST00000485412 656 ntTSL 213.15□□□□□ -0.31e-7■■■□□ 16.2
RPS3P23396 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.254e-8■■■□□ 16.2
RPS3P23396 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.344e-8■■■□□ 16.2
RPS3P23396 TMEM123-203ENST00000525577 550 ntTSL 4-0.81□□□□□ -2.544e-8■■■□□ 16.2
RPS3P23396 TKT-205ENST00000460243 615 ntTSL 210.14□□□□□ -0.793e-23■■■□□ 16.2
RPS3P23396 UROD-210ENST00000466193 524 ntTSL 218.25■□□□□ 0.519e-11■■■□□ 16.2
Retrieved 100 of 24,271 protein–RNA pairs in 347.3 ms