Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAB5AP20339 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 AC027612.3-201ENST00000413684 1047 ntBASIC13.68□□□□□ -0.22
RAB5AP20339 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5AP20339 AL162412.1-201ENST00000567129 965 ntBASIC13.68□□□□□ -0.22
RAB5AP20339 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB5AP20339 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB5AP20339 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB5AP20339 AC116353.5-201ENST00000638148 1699 ntBASIC13.68□□□□□ -0.22
RAB5AP20339 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5AP20339 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB5AP20339 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5AP20339 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5AP20339 SNX18-202ENST00000343017 3140 ntBASIC13.68□□□□□ -0.22
RAB5AP20339 HLA-J-201ENST00000462773 1622 ntBASIC13.68□□□□□ -0.22
RAB5AP20339 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5AP20339 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5AP20339 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB5AP20339 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.67□□□□□ -0.22
RAB5AP20339 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB5AP20339 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB5AP20339 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB5AP20339 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5AP20339 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB5AP20339 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RAB5AP20339 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 AC067930.6-201ENST00000623257 4947 ntBASIC13.66□□□□□ -0.22
RAB5AP20339 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB5AP20339 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 AC078925.2-201ENST00000624013 1973 ntBASIC13.66□□□□□ -0.22
RAB5AP20339 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 KRT19P1-201ENST00000405746 1186 ntBASIC13.66□□□□□ -0.22
RAB5AP20339 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB5AP20339 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 AC100791.3-201ENST00000617619 330 ntBASIC13.66□□□□□ -0.22
RAB5AP20339 AC105020.6-201ENST00000621523 1217 ntBASIC13.66□□□□□ -0.22
RAB5AP20339 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB5AP20339 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB5AP20339 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms