Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HIST1H1DP16402 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H1DP16402 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 AC024563.2-201ENST00000603282 481 ntBASIC14.93□□□□□ -0.02
HIST1H1DP16402 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H1DP16402 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HIST1H1DP16402 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HIST1H1DP16402 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HIST1H1DP16402 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1DP16402 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H1DP16402 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms