Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV12-3P01733 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV12-3P01733 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV12-3P01733 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV12-3P01733 AC133963.1-201ENST00000504166 1679 ntBASIC13.59□□□□□ -0.23
TRBV12-3P01733 AC106820.2-201ENST00000563775 3264 ntBASIC13.59□□□□□ -0.23
TRBV12-3P01733 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 KRT16P4-201ENST00000453883 522 ntBASIC13.59□□□□□ -0.23
TRBV12-3P01733 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 HLA-J-201ENST00000462773 1622 ntBASIC13.59□□□□□ -0.23
TRBV12-3P01733 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV12-3P01733 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV12-3P01733 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRBV12-3P01733 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TRBV12-3P01733 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.58□□□□□ -0.23
TRBV12-3P01733 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 AL049757.1-201ENST00000616842 1596 ntBASIC13.58□□□□□ -0.23
TRBV12-3P01733 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.58□□□□□ -0.23
TRBV12-3P01733 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV12-3P01733 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 KRT8P10-201ENST00000450021 1447 ntBASIC13.58□□□□□ -0.24
TRBV12-3P01733 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 PP12613-201ENST00000424958 2230 ntBASIC13.58□□□□□ -0.24
TRBV12-3P01733 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC026471.1-201ENST00000564629 3026 ntBASIC13.58□□□□□ -0.24
TRBV12-3P01733 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC132008.2-207ENST00000454517 770 ntBASIC13.58□□□□□ -0.24
TRBV12-3P01733 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 IFNL4P1-201ENST00000607083 540 ntBASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV12-3P01733 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV12-3P01733 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms