Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE3O75131 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 RPS2P28-201ENST00000314255 741 ntBASIC16.9■□□□□ 0.3
CPNE3O75131 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE3O75131 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE3O75131 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE3O75131 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.9■□□□□ 0.3
CPNE3O75131 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CPNE3O75131 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE3O75131 AC148477.8-201ENST00000624298 468 ntBASIC16.9■□□□□ 0.3
CPNE3O75131 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE3O75131 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CPNE3O75131 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE3O75131 PHGDH-209ENST00000641074 1780 ntBASIC16.89■□□□□ 0.3
CPNE3O75131 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE3O75131 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE3O75131 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE3O75131 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CPNE3O75131 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE3O75131 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE3O75131 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE3O75131 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.89■□□□□ 0.29
CPNE3O75131 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CPNE3O75131 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CPNE3O75131 IL9RP2-201ENST00000423948 1312 ntBASIC16.89■□□□□ 0.29
CPNE3O75131 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE3O75131 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE3O75131 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE3O75131 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 AC007967.3-201ENST00000434308 558 ntBASIC16.88■□□□□ 0.29
CPNE3O75131 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE3O75131 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.88■□□□□ 0.29
CPNE3O75131 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE3O75131 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE3O75131 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE3O75131 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 AL139288.1-201ENST00000623748 933 ntBASIC16.88■□□□□ 0.29
CPNE3O75131 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CPNE3O75131 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CPNE3O75131 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE3O75131 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE3O75131 AL356309.3-201ENST00000624132 1934 ntBASIC16.88■□□□□ 0.29
CPNE3O75131 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms