Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
URB1O60287 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.6■□□□□ 0.25
URB1O60287 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
URB1O60287 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 AP002414.1-201ENST00000391405 1147 ntBASIC16.59■□□□□ 0.25
URB1O60287 AC007967.3-201ENST00000434308 558 ntBASIC16.59■□□□□ 0.25
URB1O60287 RHOQP3-201ENST00000437982 621 ntBASIC16.59■□□□□ 0.25
URB1O60287 TSPY16P-201ENST00000449843 468 ntBASIC16.59■□□□□ 0.25
URB1O60287 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 AC067863.1-201ENST00000494933 530 ntBASIC16.59■□□□□ 0.25
URB1O60287 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 AL353135.1-201ENST00000606729 504 ntBASIC16.59■□□□□ 0.25
URB1O60287 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
URB1O60287 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 PMS2P4-201ENST00000412466 1052 ntBASIC16.59■□□□□ 0.25
URB1O60287 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.59■□□□□ 0.25
URB1O60287 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.59■□□□□ 0.25
URB1O60287 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.59■□□□□ 0.25
URB1O60287 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 AC093520.2-201ENST00000561830 333 ntBASIC16.59■□□□□ 0.25
URB1O60287 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.59■□□□□ 0.25
URB1O60287 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
URB1O60287 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.59■□□□□ 0.25
URB1O60287 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
URB1O60287 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
URB1O60287 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.58■□□□□ 0.25
URB1O60287 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
URB1O60287 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
URB1O60287 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
URB1O60287 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.58■□□□□ 0.25
URB1O60287 GAPDHP21-201ENST00000450301 1010 ntBASIC16.58■□□□□ 0.25
URB1O60287 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.58■□□□□ 0.25
URB1O60287 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
URB1O60287 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
URB1O60287 AC009102.3-201ENST00000623118 1491 ntBASIC16.58■□□□□ 0.25
URB1O60287 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
URB1O60287 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
URB1O60287 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
URB1O60287 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.58■□□□□ 0.24
URB1O60287 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
URB1O60287 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
URB1O60287 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
URB1O60287 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
URB1O60287 TFAMP1-201ENST00000412727 736 ntBASIC16.58■□□□□ 0.24
URB1O60287 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
URB1O60287 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.58■□□□□ 0.24
URB1O60287 FAM86GP-201ENST00000448322 971 ntBASIC16.58■□□□□ 0.24
URB1O60287 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
URB1O60287 IGHV3-65-201ENST00000523210 341 ntBASIC16.58■□□□□ 0.24
URB1O60287 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.58■□□□□ 0.24
URB1O60287 AC015911.4-201ENST00000588022 1070 ntBASIC16.58■□□□□ 0.24
URB1O60287 AC008667.4-201ENST00000607370 168 ntBASIC16.58■□□□□ 0.24
URB1O60287 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
URB1O60287 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
URB1O60287 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
URB1O60287 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.57■□□□□ 0.24
URB1O60287 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.57■□□□□ 0.24
URB1O60287 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.57■□□□□ 0.24
URB1O60287 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.57■□□□□ 0.24
URB1O60287 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.57■□□□□ 0.24
URB1O60287 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
URB1O60287 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.57■□□□□ 0.24
URB1O60287 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms