Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV19A0A0A6YYK7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AC097637.2-201ENST00000624096 1997 ntBASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AC005104.2-201ENST00000427818 678 ntBASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 RPS15P9-201ENST00000494093 319 ntBASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV19A0A0A6YYK7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TRAV19A0A0A6YYK7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV19A0A0A6YYK7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV19A0A0A6YYK7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 AC064836.3-201ENST00000607928 673 ntBASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV19A0A0A6YYK7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 AC008667.4-201ENST00000607370 168 ntBASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 ABALON-201ENST00000629058 1903 ntBASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV19A0A0A6YYK7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms