Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 NTF6B-201ENST00000591913 560 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 AC019129.2-201ENST00000609837 1235 ntBASIC16.84■□□□□ 0.29
BRF2Q9HAW0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BRF2Q9HAW0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRF2Q9HAW0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 AC116407.4-201ENST00000623319 1061 ntBASIC16.83■□□□□ 0.28
BRF2Q9HAW0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRF2Q9HAW0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 FAM220CP-201ENST00000395253 831 ntBASIC16.82■□□□□ 0.28
BRF2Q9HAW0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 AL590326.2-201ENST00000625139 305 ntBASIC16.82■□□□□ 0.28
BRF2Q9HAW0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRF2Q9HAW0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms