Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.83■□□□□ 0.44
NELL2Q99435 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NELL2Q99435 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.83■□□□□ 0.44
NELL2Q99435 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
NELL2Q99435 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NELL2Q99435 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 ESPNP-201ENST00000270691 2015 ntBASIC17.82■□□□□ 0.44
NELL2Q99435 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.82■□□□□ 0.44
NELL2Q99435 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.82■□□□□ 0.44
NELL2Q99435 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.82■□□□□ 0.44
NELL2Q99435 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.82■□□□□ 0.44
NELL2Q99435 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.82■□□□□ 0.44
NELL2Q99435 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 AC148477.5-201ENST00000625164 1645 ntBASIC17.82■□□□□ 0.44
NELL2Q99435 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NELL2Q99435 AC025580.3-201ENST00000617932 1424 ntBASIC17.81■□□□□ 0.44
NELL2Q99435 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 PTCHD3P3-201ENST00000403073 906 ntBASIC17.81■□□□□ 0.44
NELL2Q99435 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.81■□□□□ 0.44
NELL2Q99435 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 HLA-J-203ENST00000494367 1087 ntBASIC17.81■□□□□ 0.44
NELL2Q99435 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.81■□□□□ 0.44
NELL2Q99435 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.81■□□□□ 0.44
NELL2Q99435 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.81■□□□□ 0.44
NELL2Q99435 AL513210.1-201ENST00000629608 234 ntBASIC17.81■□□□□ 0.44
NELL2Q99435 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
NELL2Q99435 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NELL2Q99435 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NELL2Q99435 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.8■□□□□ 0.44
NELL2Q99435 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 AC093010.1-201ENST00000473625 1624 ntBASIC17.8■□□□□ 0.44
NELL2Q99435 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.8■□□□□ 0.44
NELL2Q99435 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NELL2Q99435 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.8■□□□□ 0.44
NELL2Q99435 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.8■□□□□ 0.44
NELL2Q99435 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NELL2Q99435 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NELL2Q99435 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.8■□□□□ 0.44
NELL2Q99435 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NELL2Q99435 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms