Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AC108860.2-201ENST00000562760 2183 ntBASIC17.13■□□□□ 0.33
NCLNQ969V3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 PP12613-201ENST00000424958 2230 ntBASIC17.13■□□□□ 0.33
NCLNQ969V3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLNQ969V3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLNQ969V3 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
NCLNQ969V3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCLNQ969V3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.12■□□□□ 0.33
NCLNQ969V3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCLNQ969V3 PCED1CP-201ENST00000419887 785 ntBASIC17.12■□□□□ 0.33
NCLNQ969V3 PVRIG2P-201ENST00000435460 978 ntBASIC17.12■□□□□ 0.33
NCLNQ969V3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.12■□□□□ 0.33
NCLNQ969V3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.12■□□□□ 0.33
NCLNQ969V3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NCLNQ969V3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 SDHAP2-201ENST00000455183 2001 ntBASIC17.12■□□□□ 0.33
NCLNQ969V3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 AC005332.1-201ENST00000577698 1310 ntBASIC17.12■□□□□ 0.33
NCLNQ969V3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NCLNQ969V3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCLNQ969V3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLNQ969V3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCLNQ969V3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
NCLNQ969V3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
NCLNQ969V3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 MIR149-201ENST00000384879 89 ntBASIC17.11■□□□□ 0.33
NCLNQ969V3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.11■□□□□ 0.33
NCLNQ969V3 AC091076.1-201ENST00000610741 619 ntBASIC17.11■□□□□ 0.33
NCLNQ969V3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NCLNQ969V3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLNQ969V3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.11■□□□□ 0.33
NCLNQ969V3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLNQ969V3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NCLNQ969V3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCLNQ969V3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLNQ969V3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.1■□□□□ 0.33
NCLNQ969V3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.1■□□□□ 0.33
NCLNQ969V3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLNQ969V3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.1■□□□□ 0.33
NCLNQ969V3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLNQ969V3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NCLNQ969V3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms