Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DRAXINP1-201ENST00000437611 948 ntBASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 AP002414.4-201ENST00000589764 1148 ntBASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 AC012313.10-201ENST00000623509 926 ntBASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH19Q8TAB3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AC080080.1-201ENST00000625121 2420 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AL450487.1-201ENST00000426799 995 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AC122714.2-201ENST00000502787 707 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 MIR3180-1-201ENST00000580374 94 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 MIR3180-3-201ENST00000584616 94 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AL139327.4-201ENST00000612362 153 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH19Q8TAB3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 AL049757.1-201ENST00000616842 1596 ntBASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH19Q8TAB3 AP001094.4-201ENST00000579008 2176 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 BCL2-203ENST00000589955 5011 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms