Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NGEFQ8N5V2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NGEFQ8N5V2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NGEFQ8N5V2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 INTS4P1-201ENST00000438455 1935 ntBASIC23.12■■□□□ 1.29
NGEFQ8N5V2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 RCN1P2-201ENST00000398357 915 ntBASIC23.12■■□□□ 1.29
NGEFQ8N5V2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 AC132008.2-207ENST00000454517 770 ntBASIC23.12■■□□□ 1.29
NGEFQ8N5V2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 AD001527.2-201ENST00000622994 785 ntBASIC23.12■■□□□ 1.29
NGEFQ8N5V2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC23.12■■□□□ 1.29
NGEFQ8N5V2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 AL022342.1-201ENST00000400363 863 ntBASIC23.11■■□□□ 1.29
NGEFQ8N5V2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 AC109462.3-201ENST00000573934 613 ntBASIC23.11■■□□□ 1.29
NGEFQ8N5V2 STK25P1-201ENST00000585406 838 ntBASIC23.11■■□□□ 1.29
NGEFQ8N5V2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC23.11■■□□□ 1.29
NGEFQ8N5V2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 AL645608.8-201ENST00000606034 2086 ntBASIC23.1■■□□□ 1.29
NGEFQ8N5V2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC23.1■■□□□ 1.29
NGEFQ8N5V2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 HLA-A-201ENST00000376802 1334 ntBASIC23.09■■□□□ 1.29
NGEFQ8N5V2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NGEFQ8N5V2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms