Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC073592.5-201ENST00000624854 528 ntBASIC19.44■□□□□ 0.7
GPC3P51654 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.44■□□□□ 0.7
GPC3P51654 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
GPC3P51654 AL049757.1-201ENST00000616842 1596 ntBASIC19.44■□□□□ 0.7
GPC3P51654 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GPC3P51654 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 SIGLEC16-201ENST00000599858 1437 ntBASIC19.43■□□□□ 0.7
GPC3P51654 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC3P51654 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 AL353593.2-201ENST00000602529 1483 ntBASIC19.43■□□□□ 0.7
GPC3P51654 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.43■□□□□ 0.7
GPC3P51654 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 MIR574-201ENST00000385209 96 ntBASIC19.43■□□□□ 0.7
GPC3P51654 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.43■□□□□ 0.7
GPC3P51654 SPDYE21P-201ENST00000413323 827 ntBASIC19.43■□□□□ 0.7
GPC3P51654 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.43■□□□□ 0.7
GPC3P51654 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.43■□□□□ 0.7
GPC3P51654 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC3P51654 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.43■□□□□ 0.7
GPC3P51654 AC106730.1-201ENST00000566722 1090 ntBASIC19.43■□□□□ 0.7
GPC3P51654 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.43■□□□□ 0.7
GPC3P51654 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 AC107918.4-202ENST00000641623 219 ntBASIC19.43■□□□□ 0.7
GPC3P51654 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC3P51654 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
GPC3P51654 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC3P51654 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GPC3P51654 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC3P51654 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC3P51654 RPL13AP23-201ENST00000480739 586 ntBASIC19.42■□□□□ 0.7
GPC3P51654 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC3P51654 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC3P51654 AC008735.5-201ENST00000623544 497 ntBASIC19.42■□□□□ 0.7
GPC3P51654 AL022326.1-202ENST00000641533 845 ntBASIC19.42■□□□□ 0.7
GPC3P51654 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 HLA-J-201ENST00000462773 1622 ntBASIC19.42■□□□□ 0.7
GPC3P51654 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC3P51654 AC004817.3-201ENST00000602957 2129 ntBASIC19.42■□□□□ 0.7
GPC3P51654 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC3P51654 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC3P51654 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GPC3P51654 PMS2P1-201ENST00000431037 1228 ntBASIC19.41■□□□□ 0.7
GPC3P51654 DDX43P3-201ENST00000441064 443 ntBASIC19.41■□□□□ 0.7
GPC3P51654 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.41■□□□□ 0.7
GPC3P51654 IGHV3-22-201ENST00000520721 359 ntBASIC19.41■□□□□ 0.7
GPC3P51654 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.41■□□□□ 0.7
GPC3P51654 AC019129.2-201ENST00000609837 1235 ntBASIC19.41■□□□□ 0.7
GPC3P51654 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC3P51654 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GPC3P51654 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC3P51654 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms