Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.221e-8■■■□□ 16.3
RPS3P23396 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.221e-8■■■□□ 16.3
RPS3P23396 AIFM1-204ENST00000416073 2248 ntTSL 1 (best)15.34■□□□□ 0.051e-8■■■□□ 16.3
RPS3P23396 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.93□□□□□ -0.021e-8■■■□□ 16.3
RPS3P23396 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.083e-6■■■□□ 16.3
RPS3P23396 KIAA1191-207ENST00000506668 741 ntTSL 213.21□□□□□ -0.293e-6■■■□□ 16.3
RPS3P23396 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.343e-6■■■□□ 16.3
RPS3P23396 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■■□□ 16.3
RPS3P23396 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.69□□□□□ -0.381e-8■■■□□ 16.3
RPS3P23396 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC11.97□□□□□ -0.493e-6■■■□□ 16.3
RPS3P23396 KIAA1191-204ENST00000503082 639 ntTSL 211.86□□□□□ -0.513e-6■■■□□ 16.3
RPS3P23396 KIAA1191-205ENST00000504688 486 ntTSL 511.52□□□□□ -0.573e-6■■■□□ 16.3
RPS3P23396 KIAA1191-208ENST00000506983 512 ntTSL 211.35□□□□□ -0.593e-6■■■□□ 16.3
RPS3P23396 KIAA1191-212ENST00000614420 2631 ntTSL 5 BASIC11.13□□□□□ -0.633e-6■■■□□ 16.3
RPS3P23396 KIAA1191-213ENST00000620366 2452 ntTSL 3 BASIC10.99□□□□□ -0.653e-6■■■□□ 16.3
RPS3P23396 KIAA1191-209ENST00000508023 562 ntTSL 210.91□□□□□ -0.663e-6■■■□□ 16.3
RPS3P23396 AIFM1-206ENST00000527892 2105 ntTSL 29.88□□□□□ -0.831e-8■■■□□ 16.3
RPS3P23396 KIAA1191-203ENST00000393728 2243 ntTSL 1 (best)9.77□□□□□ -0.853e-6■■■□□ 16.3
RPS3P23396 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.54□□□□□ -1.21e-8■■■□□ 16.3
RPS3P23396 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.13■□□□□ 0.493e-21■■■□□ 16.3
RPS3P23396 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.66□□□□□ -1.181e-6■■■□□ 16.3
RPS3P23396 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.451e-6■■■□□ 16.3
RPS3P23396 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.541e-6■■■□□ 16.3
RPS3P23396 FDPS-215ENST00000490140 680 ntTSL 211.23□□□□□ -0.612e-12■■■□□ 16.3
RPS3P23396 CFL1-215ENST00000534784 737 ntTSL 317.68■□□□□ 0.423e-28■■■□□ 16.3
RPS3P23396 PLOD3-209ENST00000460475 746 ntTSL 317.36■□□□□ 0.375e-7■■■□□ 16.3
RPS3P23396 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.034e-8■■■□□ 16.3
RPS3P23396 MXRA8-204ENST00000460473 339 ntTSL 224.2■■□□□ 1.461e-7■■■□□ 16.3
RPS3P23396 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.181e-7■■■□□ 16.3
RPS3P23396 G3BP1-207ENST00000520006 754 ntTSL 520.78■□□□□ 0.925e-14■■■□□ 16.3
RPS3P23396 FLOT1-208ENST00000470643 852 ntTSL 320.58■□□□□ 0.891e-7■■■□□ 16.3
RPS3P23396 FLOT1-210ENST00000484168 1101 ntTSL 520.58■□□□□ 0.891e-7■■■□□ 16.3
RPS3P23396 CNDP2-211ENST00000580672 661 ntTSL 520.27■□□□□ 0.841e-7■■■□□ 16.3
RPS3P23396 FLII-210ENST00000488221 859 ntTSL 519.84■□□□□ 0.771e-7■■■□□ 16.3
RPS3P23396 TRIM47-204ENST00000587339 1907 ntTSL 1 (best)19.68■□□□□ 0.741e-9■■■□□ 16.3
RPS3P23396 GARS-203ENST00000454308 814 ntTSL 519.53■□□□□ 0.721e-8■■■□□ 16.3
RPS3P23396 FLOT1-202ENST00000413165 856 ntTSL 519.42■□□□□ 0.71e-7■■■□□ 16.3
RPS3P23396 COPE-207ENST00000597646 868 ntTSL 319.2■□□□□ 0.663e-11■■■□□ 16.3
RPS3P23396 ALDH9A1-202ENST00000461664 899 ntTSL 318.89■□□□□ 0.611e-7■■■□□ 16.3
RPS3P23396 COPE-209ENST00000599964 542 ntTSL 418.75■□□□□ 0.593e-11■■■□□ 16.3
RPS3P23396 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.581e-9■■■□□ 16.3
RPS3P23396 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.558e-7■■■□□ 16.3
RPS3P23396 FLOT1-211ENST00000484693 1001 ntTSL 218.36■□□□□ 0.531e-7■■■□□ 16.3
RPS3P23396 YTHDF2-206ENST00000478283 2594 ntTSL 1 (best)18.12■□□□□ 0.491e-7■■■□□ 16.3
RPS3P23396 FBXO22-206ENST00000565131 471 ntTSL 317.95■□□□□ 0.461e-9■■■□□ 16.3
RPS3P23396 EIF2B4-203ENST00000417567 761 ntTSL 517.94■□□□□ 0.461e-7■■■□□ 16.3
RPS3P23396 FBXO22-207ENST00000569022 2164 ntTSL 1 (best)17.38■□□□□ 0.371e-9■■■□□ 16.3
RPS3P23396 FBXO22-205ENST00000565036 725 ntTSL 517.02■□□□□ 0.321e-9■■■□□ 16.3
RPS3P23396 YTHDF2-203ENST00000474884 864 ntTSL 516.98■□□□□ 0.311e-7■■■□□ 16.3
RPS3P23396 YTHDF2-207ENST00000496288 879 ntTSL 216.97■□□□□ 0.311e-7■■■□□ 16.3
RPS3P23396 CNDP2-227ENST00000584613 595 ntTSL 316.26■□□□□ 0.191e-7■■■□□ 16.3
RPS3P23396 FBXO22-209ENST00000569749 1496 ntTSL 1 (best)16■□□□□ 0.151e-9■■■□□ 16.3
RPS3P23396 CNDP2-216ENST00000582260 743 ntTSL 515.83■□□□□ 0.121e-7■■■□□ 16.3
RPS3P23396 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.8■□□□□ 0.121e-7■■■□□ 16.3
RPS3P23396 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.121e-7■■■□□ 16.3
RPS3P23396 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.71■□□□□ 0.118e-7■■■□□ 16.3
RPS3P23396 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.56■□□□□ 0.081e-9■■■□□ 16.3
RPS3P23396 FLOT1-204ENST00000418160 457 ntTSL 315.2■□□□□ 0.021e-7■■■□□ 16.3
RPS3P23396 TRIM47-206ENST00000592942 793 ntTSL 214.96□□□□□ -0.011e-9■■■□□ 16.3
RPS3P23396 G3BP1-213ENST00000523519 535 ntTSL 414.41□□□□□ -0.15e-14■■■□□ 16.3
RPS3P23396 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.16□□□□□ -0.141e-7■■■□□ 16.3
RPS3P23396 ABHD4-208ENST00000542041 465 ntTSL 414.03□□□□□ -0.161e-7■■■□□ 16.3
RPS3P23396 ABHD4-206ENST00000539344 986 ntTSL 214.03□□□□□ -0.161e-7■■■□□ 16.3
RPS3P23396 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.171e-7■■■□□ 16.3
RPS3P23396 FLOT1-207ENST00000454845 629 ntTSL 313.97□□□□□ -0.171e-7■■■□□ 16.3
RPS3P23396 ABHD4-207ENST00000541962 662 ntTSL 513.87□□□□□ -0.191e-7■■■□□ 16.3
RPS3P23396 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.21e-7■■■□□ 16.3
RPS3P23396 CNDP2-224ENST00000583785 1135 ntTSL 213.48□□□□□ -0.251e-7■■■□□ 16.3
RPS3P23396 PIPOX-206ENST00000577182 633 ntTSL 513.27□□□□□ -0.291e-7■■■□□ 16.3
RPS3P23396 FLOT1-205ENST00000438162 888 ntTSL 513.25□□□□□ -0.291e-7■■■□□ 16.3
RPS3P23396 CNDP2-222ENST00000583399 601 ntTSL 213.18□□□□□ -0.31e-7■■■□□ 16.3
RPS3P23396 ALDH9A1-205ENST00000491436 819 ntTSL 213.18□□□□□ -0.31e-7■■■□□ 16.3
RPS3P23396 TRIM47-202ENST00000585333 595 ntTSL 312.83□□□□□ -0.361e-9■■■□□ 16.3
RPS3P23396 PRPF8-207ENST00000573681 1044 ntTSL 212.81□□□□□ -0.363e-6■■■□□ 16.3
RPS3P23396 FLII-211ENST00000488932 838 ntTSL 312.63□□□□□ -0.391e-7■■■□□ 16.3
RPS3P23396 FLII-218ENST00000577485 555 ntTSL 512.37□□□□□ -0.431e-7■■■□□ 16.3
RPS3P23396 SSRP1-203ENST00000526696 948 ntTSL 312.36□□□□□ -0.431e-9■■■□□ 16.3
RPS3P23396 GALM-202ENST00000410063 1023 ntTSL 3 BASIC12.35□□□□□ -0.432e-7■■■□□ 16.3
RPS3P23396 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.441e-7■■■□□ 16.3
RPS3P23396 CPVL-209ENST00000455544 571 ntTSL 412.29□□□□□ -0.441e-7■■■□□ 16.3
RPS3P23396 CNDP2-212ENST00000581272 547 ntTSL 412.15□□□□□ -0.461e-7■■■□□ 16.3
RPS3P23396 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.03□□□□□ -0.481e-7■■■□□ 16.3
RPS3P23396 CNDP2-213ENST00000581513 568 ntTSL 311.96□□□□□ -0.491e-7■■■□□ 16.3
RPS3P23396 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.51e-9■■■□□ 16.3
RPS3P23396 CNDP2-219ENST00000582666 572 ntTSL 211.8□□□□□ -0.521e-7■■■□□ 16.3
RPS3P23396 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC11.8□□□□□ -0.521e-7■■■□□ 16.3
RPS3P23396 CNDP2-203ENST00000577355 536 ntTSL 311.8□□□□□ -0.521e-7■■■□□ 16.3
RPS3P23396 FLOT1-206ENST00000445853 792 ntTSL 1 (best)11.73□□□□□ -0.531e-7■■■□□ 16.3
RPS3P23396 GNAI2-208ENST00000468422 531 ntTSL 211.57□□□□□ -0.561e-7■■■□□ 16.3
RPS3P23396 FLOT1-203ENST00000416018 592 ntTSL 311.34□□□□□ -0.591e-7■■■□□ 16.3
RPS3P23396 GALNT2-204ENST00000492568 2766 ntTSL 210.98□□□□□ -0.651e-7■■■□□ 16.3
RPS3P23396 CNDP2-221ENST00000583216 574 ntTSL 410.96□□□□□ -0.651e-7■■■□□ 16.3
RPS3P23396 CNDP2-217ENST00000582589 539 ntTSL 510.86□□□□□ -0.671e-7■■■□□ 16.3
RPS3P23396 ABHD4-209ENST00000544562 929 ntTSL 210.77□□□□□ -0.691e-7■■■□□ 16.3
RPS3P23396 ABHD4-202ENST00000418446 1003 ntTSL 210.74□□□□□ -0.691e-7■■■□□ 16.3
RPS3P23396 FLII-220ENST00000578101 4148 ntTSL 210.65□□□□□ -0.71e-7■■■□□ 16.3
RPS3P23396 GALM-201ENST00000272252 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.732e-7■■■□□ 16.3
RPS3P23396 PIPOX-207ENST00000578748 790 ntTSL 310.45□□□□□ -0.741e-7■■■□□ 16.3
RPS3P23396 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC10.41□□□□□ -0.741e-7■■■□□ 16.3
RPS3P23396 ABHD4-205ENST00000537243 550 ntTSL 510.38□□□□□ -0.751e-7■■■□□ 16.3
Retrieved 100 of 24,271 protein–RNA pairs in 264.8 ms