Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC021087.4-201ENST00000563761 564 ntBASIC18.64■□□□□ 0.57
PTPN1P18031 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN1P18031 STK25P1-201ENST00000585406 838 ntBASIC18.64■□□□□ 0.57
PTPN1P18031 AC064862.7-201ENST00000604520 867 ntBASIC18.64■□□□□ 0.57
PTPN1P18031 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN1P18031 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN1P18031 LINC01451-201ENST00000623792 534 ntBASIC18.64■□□□□ 0.57
PTPN1P18031 AC148477.8-201ENST00000624298 468 ntBASIC18.64■□□□□ 0.57
PTPN1P18031 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN1P18031 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN1P18031 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN1P18031 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PTPN1P18031 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN1P18031 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PTPN1P18031 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN1P18031 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN1P18031 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PTPN1P18031 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN1P18031 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN1P18031 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PTPN1P18031 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 AF186996.4-201ENST00000467186 377 ntBASIC18.63■□□□□ 0.57
PTPN1P18031 BX005266.1-201ENST00000473402 457 ntBASIC18.63■□□□□ 0.57
PTPN1P18031 AC073648.2-201ENST00000510116 352 ntBASIC18.63■□□□□ 0.57
PTPN1P18031 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
PTPN1P18031 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN1P18031 SIGLEC16-201ENST00000599858 1437 ntBASIC18.63■□□□□ 0.57
PTPN1P18031 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN1P18031 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN1P18031 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN1P18031 LTB4R2-202ENST00000528054 3092 ntBASIC18.63■□□□□ 0.57
PTPN1P18031 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 AC004817.3-201ENST00000602957 2129 ntBASIC18.62■□□□□ 0.57
PTPN1P18031 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN1P18031 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 AC003669.1-201ENST00000334569 611 ntBASIC18.62■□□□□ 0.57
PTPN1P18031 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 MYCLP1-201ENST00000372451 1075 ntBASIC18.62■□□□□ 0.57
PTPN1P18031 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 AL020989.1-201ENST00000422979 469 ntBASIC18.62■□□□□ 0.57
PTPN1P18031 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN1P18031 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN1P18031 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN1P18031 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN1P18031 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN1P18031 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN1P18031 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN1P18031 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
PTPN1P18031 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN1P18031 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN1P18031 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN1P18031 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms