Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 AC073195.1-201ENST00000607241 877 ntBASIC13.17□□□□□ -0.3
SMIM17P0DL12 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 KRT18P55-202ENST00000578578 1546 ntBASIC13.17□□□□□ -0.3
SMIM17P0DL12 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM17P0DL12 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM17P0DL12 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 AP001094.4-201ENST00000579008 2176 ntBASIC13.16□□□□□ -0.3
SMIM17P0DL12 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 MIR3180-5-201ENST00000583743 153 ntBASIC13.16□□□□□ -0.3
SMIM17P0DL12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 AL163051.1-201ENST00000569214 1512 ntBASIC13.16□□□□□ -0.3
SMIM17P0DL12 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM17P0DL12 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM17P0DL12 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
SMIM17P0DL12 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM17P0DL12 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms