Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.76■□□□□ 0.43
RETP07949 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.76■□□□□ 0.43
RETP07949 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 SPCS2P1-201ENST00000561636 679 ntBASIC17.76■□□□□ 0.43
RETP07949 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.76■□□□□ 0.43
RETP07949 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.76■□□□□ 0.43
RETP07949 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
RETP07949 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
RETP07949 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
RETP07949 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RETP07949 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RETP07949 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.75■□□□□ 0.43
RETP07949 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.75■□□□□ 0.43
RETP07949 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.75■□□□□ 0.43
RETP07949 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.75■□□□□ 0.43
RETP07949 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.75■□□□□ 0.43
RETP07949 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.75■□□□□ 0.43
RETP07949 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RETP07949 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RETP07949 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RETP07949 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.74■□□□□ 0.43
RETP07949 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RETP07949 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RETP07949 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.74■□□□□ 0.43
RETP07949 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.74■□□□□ 0.43
RETP07949 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.74■□□□□ 0.43
RETP07949 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RETP07949 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RETP07949 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.74■□□□□ 0.43
RETP07949 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.74■□□□□ 0.43
RETP07949 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.74■□□□□ 0.43
RETP07949 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 HLA-J-203ENST00000494367 1087 ntBASIC17.74■□□□□ 0.43
RETP07949 AC136632.2-201ENST00000512891 861 ntBASIC17.74■□□□□ 0.43
RETP07949 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.74■□□□□ 0.43
RETP07949 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.74■□□□□ 0.43
RETP07949 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RETP07949 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.74■□□□□ 0.43
RETP07949 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.74■□□□□ 0.43
RETP07949 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RETP07949 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.74■□□□□ 0.43
RETP07949 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 AP000997.3-201ENST00000623333 2250 ntBASIC17.74■□□□□ 0.43
RETP07949 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.74■□□□□ 0.43
RETP07949 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RETP07949 AC126763.1-201ENST00000552015 2118 ntBASIC17.74■□□□□ 0.43
RETP07949 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RETP07949 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms