Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.97□□□□□ -0.01
CD3DP04234 LINC00167-201ENST00000530583 1419 ntBASIC14.97□□□□□ -0.01
CD3DP04234 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CD3DP04234 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.97□□□□□ -0.01
CD3DP04234 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CD3DP04234 PCDHB17P-201ENST00000539533 2393 ntBASIC14.97□□□□□ -0.01
CD3DP04234 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.97□□□□□ -0.01
CD3DP04234 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD3DP04234 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD3DP04234 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.96□□□□□ -0.01
CD3DP04234 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CD3DP04234 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CD3DP04234 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
CD3DP04234 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CD3DP04234 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
CD3DP04234 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.96□□□□□ -0.01
CD3DP04234 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.96□□□□□ -0.01
CD3DP04234 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 DDX43P3-201ENST00000441064 443 ntBASIC14.96□□□□□ -0.01
CD3DP04234 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.96□□□□□ -0.01
CD3DP04234 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.96□□□□□ -0.01
CD3DP04234 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.96□□□□□ -0.01
CD3DP04234 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.96□□□□□ -0.01
CD3DP04234 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 LYSMD4-203ENST00000378904 2122 ntBASIC14.96□□□□□ -0.01
CD3DP04234 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD3DP04234 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD3DP04234 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD3DP04234 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.96□□□□□ -0.02
CD3DP04234 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.95□□□□□ -0.02
CD3DP04234 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.95□□□□□ -0.02
CD3DP04234 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CD3DP04234 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CD3DP04234 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.95□□□□□ -0.02
CD3DP04234 AC112497.1-201ENST00000624824 639 ntBASIC14.95□□□□□ -0.02
CD3DP04234 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 AC026691.1-201ENST00000602502 2017 ntBASIC14.95□□□□□ -0.02
CD3DP04234 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CD3DP04234 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD3DP04234 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD3DP04234 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD3DP04234 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.94□□□□□ -0.02
CD3DP04234 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD3DP04234 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms