Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 KRT18P65-201ENST00000439811 1286 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 NUS1P1-201ENST00000446295 882 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 AC068472.1-201ENST00000474589 881 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM3O75382 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM3O75382 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.46■□□□□ 0.23
TRIM3O75382 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 AC011840.4-201ENST00000578471 627 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 Z69720.1-201ENST00000601483 472 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM3O75382 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM3O75382 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM3O75382 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TRIM3O75382 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM3O75382 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRIM3O75382 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM3O75382 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.46■□□□□ 0.22
TRIM3O75382 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRIM3O75382 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRIM3O75382 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 AC012317.2-201ENST00000623305 2251 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRIM3O75382 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 SLC25A6P5-201ENST00000435663 894 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM3O75382 VENTXP7-201ENST00000475503 772 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 KRT126P-201ENST00000549467 1181 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM3O75382 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.45■□□□□ 0.22
TRIM3O75382 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 AC012313.10-201ENST00000623509 926 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 PHGDH-209ENST00000641074 1780 ntBASIC16.45■□□□□ 0.22
TRIM3O75382 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRIM3O75382 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM3O75382 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM3O75382 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM3O75382 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM3O75382 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TRIM3O75382 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM3O75382 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM3O75382 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
TRIM3O75382 IGHV3-47-201ENST00000425060 335 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 KRT17P6-201ENST00000453795 1220 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 AC091607.1-201ENST00000490318 1060 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 AC104819.1-201ENST00000504587 486 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms