Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCMT2O60294 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LCMT2O60294 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.84■□□□□ 0.29
LCMT2O60294 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.84■□□□□ 0.29
LCMT2O60294 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.84■□□□□ 0.29
LCMT2O60294 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.84■□□□□ 0.29
LCMT2O60294 AC091304.2-201ENST00000564639 760 ntBASIC16.84■□□□□ 0.29
LCMT2O60294 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.84■□□□□ 0.29
LCMT2O60294 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.84■□□□□ 0.29
LCMT2O60294 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 AD001527.2-201ENST00000622994 785 ntBASIC16.84■□□□□ 0.29
LCMT2O60294 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.84■□□□□ 0.29
LCMT2O60294 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.84■□□□□ 0.29
LCMT2O60294 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.84■□□□□ 0.29
LCMT2O60294 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LCMT2O60294 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
LCMT2O60294 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 PP12613-201ENST00000424958 2230 ntBASIC16.84■□□□□ 0.29
LCMT2O60294 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LCMT2O60294 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
LCMT2O60294 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.83■□□□□ 0.28
LCMT2O60294 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.83■□□□□ 0.28
LCMT2O60294 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.83■□□□□ 0.28
LCMT2O60294 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 AC002558.1-201ENST00000488906 803 ntBASIC16.83■□□□□ 0.28
LCMT2O60294 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 UNC93B7-201ENST00000509439 705 ntBASIC16.83■□□□□ 0.28
LCMT2O60294 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LCMT2O60294 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.83■□□□□ 0.28
LCMT2O60294 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LCMT2O60294 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.83■□□□□ 0.28
LCMT2O60294 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LCMT2O60294 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LCMT2O60294 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.82■□□□□ 0.28
LCMT2O60294 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
LCMT2O60294 AL353593.2-201ENST00000602529 1483 ntBASIC16.82■□□□□ 0.28
LCMT2O60294 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.82■□□□□ 0.28
LCMT2O60294 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.82■□□□□ 0.28
LCMT2O60294 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.82■□□□□ 0.28
LCMT2O60294 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.82■□□□□ 0.28
LCMT2O60294 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 HTR7P1-202ENST00000624664 4411 ntBASIC16.82■□□□□ 0.28
LCMT2O60294 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LCMT2O60294 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms