Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SEMA3EO15041 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.13■□□□□ 0.97
SEMA3EO15041 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SEMA3EO15041 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SEMA3EO15041 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.13■□□□□ 0.97
SEMA3EO15041 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.13■□□□□ 0.97
SEMA3EO15041 AC040169.1-201ENST00000565382 521 ntBASIC21.13■□□□□ 0.97
SEMA3EO15041 AL139327.4-201ENST00000612362 153 ntBASIC21.13■□□□□ 0.97
SEMA3EO15041 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.13■□□□□ 0.97
SEMA3EO15041 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.13■□□□□ 0.97
SEMA3EO15041 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.13■□□□□ 0.97
SEMA3EO15041 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SEMA3EO15041 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.12■□□□□ 0.97
SEMA3EO15041 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA3EO15041 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA3EO15041 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 AC006116.8-202ENST00000587620 1550 ntBASIC21.12■□□□□ 0.97
SEMA3EO15041 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 AP002414.1-201ENST00000391405 1147 ntBASIC21.12■□□□□ 0.97
SEMA3EO15041 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SEMA3EO15041 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.12■□□□□ 0.97
SEMA3EO15041 PRSS29P-201ENST00000440800 595 ntBASIC21.12■□□□□ 0.97
SEMA3EO15041 AC108073.2-201ENST00000464002 357 ntBASIC21.12■□□□□ 0.97
SEMA3EO15041 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA3EO15041 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.12■□□□□ 0.97
SEMA3EO15041 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.12■□□□□ 0.97
SEMA3EO15041 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.12■□□□□ 0.97
SEMA3EO15041 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.12■□□□□ 0.97
SEMA3EO15041 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.12■□□□□ 0.97
SEMA3EO15041 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SEMA3EO15041 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 AC046185.3-201ENST00000623228 1824 ntBASIC21.11■□□□□ 0.97
SEMA3EO15041 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SEMA3EO15041 AC007967.2-201ENST00000432613 625 ntBASIC21.11■□□□□ 0.97
SEMA3EO15041 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 AC064836.3-201ENST00000607928 673 ntBASIC21.11■□□□□ 0.97
SEMA3EO15041 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.11■□□□□ 0.97
SEMA3EO15041 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SEMA3EO15041 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SEMA3EO15041 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.11■□□□□ 0.97
SEMA3EO15041 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SEMA3EO15041 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.1■□□□□ 0.97
SEMA3EO15041 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SEMA3EO15041 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA3EO15041 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.1■□□□□ 0.97
SEMA3EO15041 AC092865.5-201ENST00000545435 363 ntBASIC21.1■□□□□ 0.97
SEMA3EO15041 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA3EO15041 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.1■□□□□ 0.97
SEMA3EO15041 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.1■□□□□ 0.97
SEMA3EO15041 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms