Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC188H7C350 AC024563.2-201ENST00000603282 481 ntBASIC18.33■□□□□ 0.52
CCDC188H7C350 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC188H7C350 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC188H7C350 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC188H7C350 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CCDC188H7C350 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC188H7C350 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC188H7C350 AC046185.3-201ENST00000623228 1824 ntBASIC18.33■□□□□ 0.52
CCDC188H7C350 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC188H7C350 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCDC188H7C350 MIR1238-201ENST00000408483 83 ntBASIC18.32■□□□□ 0.52
CCDC188H7C350 GCSHP5-201ENST00000443090 522 ntBASIC18.32■□□□□ 0.52
CCDC188H7C350 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC188H7C350 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC188H7C350 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC188H7C350 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC188H7C350 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 AC009154.2-201ENST00000621177 724 ntBASIC18.32■□□□□ 0.52
CCDC188H7C350 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC188H7C350 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC188H7C350 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC188H7C350 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC188H7C350 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC188H7C350 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC188H7C350 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 AC098590.1-201ENST00000468126 897 ntBASIC18.31■□□□□ 0.52
CCDC188H7C350 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCDC188H7C350 MIR4785-201ENST00000585005 73 ntBASIC18.31■□□□□ 0.52
CCDC188H7C350 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC188H7C350 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC188H7C350 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC188H7C350 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC188H7C350 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC188H7C350 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC188H7C350 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC188H7C350 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCDC188H7C350 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC188H7C350 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC188H7C350 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
CCDC188H7C350 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC188H7C350 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 AP000523.1-201ENST00000398242 1049 ntBASIC18.3■□□□□ 0.52
CCDC188H7C350 AL158047.1-201ENST00000445918 881 ntBASIC18.3■□□□□ 0.52
CCDC188H7C350 AC112698.1-201ENST00000510299 916 ntBASIC18.3■□□□□ 0.52
CCDC188H7C350 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC188H7C350 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC188H7C350 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC188H7C350 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms