Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AC018470.1-201ENST00000624790 3129 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 MYCLP1-201ENST00000372451 1075 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 FAM220CP-201ENST00000395253 831 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 RCN1P2-201ENST00000398357 915 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AC103564.2-201ENST00000432853 1299 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AC111152.3-201ENST00000569699 673 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 MIR5100-201ENST00000579544 119 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AL732292.2-201ENST00000609649 430 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
PRDM9Q9NQV7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AL591684.3-201ENST00000605187 298 ntBASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AC010460.3-201ENST00000511359 1579 ntBASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRDM9Q9NQV7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 INTS4P1-201ENST00000438455 1935 ntBASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AL133373.2-201ENST00000623187 2828 ntBASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.66■□□□□ 0.26
PRDM9Q9NQV7 AL691432.3-201ENST00000621860 400 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms