Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EFCC1Q9HA90 AL139384.1-201ENST00000612143 3047 ntBASIC20.48■□□□□ 0.87
EFCC1Q9HA90 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 AC018845.2-201ENST00000568326 409 ntBASIC20.48■□□□□ 0.87
EFCC1Q9HA90 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 AC004817.3-201ENST00000602957 2129 ntBASIC20.48■□□□□ 0.87
EFCC1Q9HA90 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EFCC1Q9HA90 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 TSEN15P1-201ENST00000423257 515 ntBASIC20.47■□□□□ 0.87
EFCC1Q9HA90 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.47■□□□□ 0.87
EFCC1Q9HA90 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.46■□□□□ 0.87
EFCC1Q9HA90 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
EFCC1Q9HA90 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 GPR89P-201ENST00000407924 1495 ntBASIC20.45■□□□□ 0.86
EFCC1Q9HA90 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms