Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AL023806.1-201ENST00000603994 1649 ntBASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC112907.2-201ENST00000448639 330 ntBASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 AC011270.2-201ENST00000624293 2550 ntBASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP61Q8NHU2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 LINC01238-205ENST00000567549 1107 ntBASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 AC079602.3-201ENST00000623931 403 ntBASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP61Q8NHU2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CFAP61Q8NHU2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP61Q8NHU2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP61Q8NHU2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP61Q8NHU2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP61Q8NHU2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms