Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF440Q8IYI8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC103564.2-201ENST00000432853 1299 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC007967.3-201ENST00000434308 558 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC087388.1-201ENST00000571370 1112 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AL138831.2-201ENST00000606564 490 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AL139327.4-201ENST00000612362 153 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC116407.4-201ENST00000623319 1061 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 AC010460.3-201ENST00000511359 1579 ntBASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF440Q8IYI8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 FAM220CP-201ENST00000395253 831 ntBASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 AC009533.2-201ENST00000543664 586 ntBASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF440Q8IYI8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF440Q8IYI8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms