Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.71□□□□□ -0.22
KCNIP4Q6PIL6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 AC007950.2-201ENST00000615045 2347 ntBASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 CYP2T1P-202ENST00000641596 2535 ntBASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KCNIP4Q6PIL6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 BX276092.2-201ENST00000417668 665 ntBASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 KRT18P16-201ENST00000510337 1294 ntBASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.69□□□□□ -0.22
KCNIP4Q6PIL6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP4Q6PIL6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms