Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 GPAT2P1-201ENST00000444924 1672 ntBASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ERCC6LQ2NKX8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 AC004980.1-204ENST00000429707 299 ntBASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 MCCD1P1-208ENST00000445732 328 ntBASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ERCC6LQ2NKX8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ERCC6LQ2NKX8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ERCC6LQ2NKX8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ERCC6LQ2NKX8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 AC016396.2-201ENST00000562575 1417 ntBASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 AC104771.1-201ENST00000603335 964 ntBASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 LYSMD4-203ENST00000378904 2122 ntBASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ERCC6LQ2NKX8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC036111.1-201ENST00000533973 1582 ntBASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC097658.1-201ENST00000475555 843 ntBASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AL138781.1-201ENST00000566567 1274 ntBASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms