Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 AC040169.1-201ENST00000565382 521 ntBASIC21.05■□□□□ 0.96
PDS5AQ29RF7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 GPALPP1-207ENST00000611650 899 ntBASIC21.05■□□□□ 0.96
PDS5AQ29RF7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.05■□□□□ 0.96
PDS5AQ29RF7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 AC064836.3-201ENST00000607928 673 ntBASIC21.04■□□□□ 0.96
PDS5AQ29RF7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 AL135999.2-201ENST00000622438 1686 ntBASIC21.04■□□□□ 0.96
PDS5AQ29RF7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.04■□□□□ 0.96
PDS5AQ29RF7 MIR940-201ENST00000401276 94 ntBASIC21.04■□□□□ 0.96
PDS5AQ29RF7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AC120498.9-201ENST00000339021 3867 ntBASIC21.03■□□□□ 0.96
PDS5AQ29RF7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AL590787.1-201ENST00000568856 1315 ntBASIC21.03■□□□□ 0.96
PDS5AQ29RF7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 PTCHD3P3-201ENST00000403073 906 ntBASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AC007967.2-201ENST00000432613 625 ntBASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.03■□□□□ 0.96
PDS5AQ29RF7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDS5AQ29RF7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms