Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SSBP1Q04837 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 PCDHA1-201ENST00000378133 2726 ntBASIC14.95□□□□□ -0.02
SSBP1Q04837 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.95□□□□□ -0.02
SSBP1Q04837 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.95□□□□□ -0.02
SSBP1Q04837 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSBP1Q04837 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SSBP1Q04837 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP1Q04837 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 AC046185.3-201ENST00000623228 1824 ntBASIC14.94□□□□□ -0.02
SSBP1Q04837 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SSBP1Q04837 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP1Q04837 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.94□□□□□ -0.02
SSBP1Q04837 AC010240.3-201ENST00000607688 395 ntBASIC14.94□□□□□ -0.02
SSBP1Q04837 CR769767.2-201ENST00000622735 460 ntBASIC14.94□□□□□ -0.02
SSBP1Q04837 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSBP1Q04837 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSBP1Q04837 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP1Q04837 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.93□□□□□ -0.02
SSBP1Q04837 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
SSBP1Q04837 AC011270.2-201ENST00000624293 2550 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SSBP1Q04837 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SSBP1Q04837 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 KRT18P29-201ENST00000397031 1267 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.93□□□□□ -0.02
SSBP1Q04837 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 AC113404.2-201ENST00000507884 177 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.93□□□□□ -0.02
SSBP1Q04837 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.93□□□□□ -0.02
SSBP1Q04837 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 PCDHB17P-201ENST00000539533 2393 ntBASIC14.93□□□□□ -0.02
SSBP1Q04837 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.93□□□□□ -0.02
SSBP1Q04837 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP1Q04837 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
SSBP1Q04837 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.92□□□□□ -0.02
SSBP1Q04837 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP1Q04837 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.92□□□□□ -0.02
SSBP1Q04837 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP1Q04837 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms