Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HTRA3P83110 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.23■□□□□ 0.83
HTRA3P83110 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HTRA3P83110 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HTRA3P83110 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 TTTY23B-201ENST00000442790 549 ntBASIC20.23■□□□□ 0.83
HTRA3P83110 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.23■□□□□ 0.83
HTRA3P83110 AC099548.2-209ENST00000480264 625 ntBASIC20.23■□□□□ 0.83
HTRA3P83110 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HTRA3P83110 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.23■□□□□ 0.83
HTRA3P83110 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.23■□□□□ 0.83
HTRA3P83110 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTRA3P83110 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.23■□□□□ 0.83
HTRA3P83110 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HTRA3P83110 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.22■□□□□ 0.83
HTRA3P83110 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.22■□□□□ 0.83
HTRA3P83110 AC020907.1-201ENST00000616460 1350 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.22■□□□□ 0.83
HTRA3P83110 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HTRA3P83110 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HTRA3P83110 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.22■□□□□ 0.83
HTRA3P83110 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
HTRA3P83110 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.22■□□□□ 0.83
HTRA3P83110 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.22■□□□□ 0.83
HTRA3P83110 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 AC004840.1-201ENST00000636359 365 ntBASIC20.22■□□□□ 0.83
HTRA3P83110 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTRA3P83110 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 AC100803.2-201ENST00000562459 1963 ntBASIC20.21■□□□□ 0.83
HTRA3P83110 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 ANKRD19P-201ENST00000338192 862 ntBASIC20.21■□□□□ 0.83
HTRA3P83110 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.21■□□□□ 0.83
HTRA3P83110 AC234783.1-201ENST00000441761 496 ntBASIC20.21■□□□□ 0.83
HTRA3P83110 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.21■□□□□ 0.83
HTRA3P83110 RNA5SP423-201ENST00000517127 109 ntBASIC20.21■□□□□ 0.83
HTRA3P83110 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HTRA3P83110 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.21■□□□□ 0.83
HTRA3P83110 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.21■□□□□ 0.83
HTRA3P83110 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HTRA3P83110 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HTRA3P83110 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20.21■□□□□ 0.83
HTRA3P83110 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTRA3P83110 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HTRA3P83110 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.2■□□□□ 0.82
HTRA3P83110 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
HTRA3P83110 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HTRA3P83110 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HTRA3P83110 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.2■□□□□ 0.82
HTRA3P83110 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.2■□□□□ 0.82
HTRA3P83110 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms