Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 PHGDH-209ENST00000641074 1780 ntBASIC13.8□□□□□ -0.2
FAM3BP58499 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FAM3BP58499 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.8□□□□□ -0.2
FAM3BP58499 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
FAM3BP58499 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FAM3BP58499 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FAM3BP58499 MYLKP1-201ENST00000509077 1580 ntBASIC13.79□□□□□ -0.2
FAM3BP58499 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
FAM3BP58499 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.79□□□□□ -0.2
FAM3BP58499 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.79□□□□□ -0.2
FAM3BP58499 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.79□□□□□ -0.2
FAM3BP58499 AC124016.1-201ENST00000609552 612 ntBASIC13.79□□□□□ -0.2
FAM3BP58499 AL121906.2-201ENST00000621597 723 ntBASIC13.79□□□□□ -0.2
FAM3BP58499 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 KRT17P2-201ENST00000300992 1314 ntBASIC13.79□□□□□ -0.2
FAM3BP58499 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
FAM3BP58499 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FAM3BP58499 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
FAM3BP58499 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 AC007950.2-201ENST00000615045 2347 ntBASIC13.78□□□□□ -0.2
FAM3BP58499 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FAM3BP58499 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 AL596275.1-201ENST00000423464 877 ntBASIC13.78□□□□□ -0.2
FAM3BP58499 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FAM3BP58499 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 RARRES2P10-201ENST00000564312 460 ntBASIC13.78□□□□□ -0.2
FAM3BP58499 AC233702.5-201ENST00000584107 538 ntBASIC13.78□□□□□ -0.2
FAM3BP58499 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FAM3BP58499 AC006557.6-201ENST00000623071 864 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms