Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 AL357140.3-201ENST00000639753 1983 ntBASIC12.06□□□□□ -0.48
PCP4P48539 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.06□□□□□ -0.48
PCP4P48539 PCDHA3-202ENST00000532566 4594 ntBASIC12.06□□□□□ -0.48
PCP4P48539 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
PCP4P48539 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
PCP4P48539 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
PCP4P48539 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
PCP4P48539 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PCP4P48539 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.04□□□□□ -0.48
PCP4P48539 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
PCP4P48539 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms