Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NKX2-1P43699 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX2-1P43699 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 MFAP1P1-201ENST00000442257 1255 ntBASIC14.47□□□□□ -0.09
NKX2-1P43699 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 MIR3180-4-201ENST00000582223 153 ntBASIC14.47□□□□□ -0.09
NKX2-1P43699 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX2-1P43699 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-1P43699 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX2-1P43699 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
NKX2-1P43699 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.46□□□□□ -0.09
NKX2-1P43699 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NKX2-1P43699 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.46□□□□□ -0.09
NKX2-1P43699 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-1P43699 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.46□□□□□ -0.09
NKX2-1P43699 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NKX2-1P43699 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.46□□□□□ -0.09
NKX2-1P43699 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 AC016396.2-201ENST00000562575 1417 ntBASIC14.46□□□□□ -0.09
NKX2-1P43699 REXO1L11P-201ENST00000620964 1927 ntBASIC14.46□□□□□ -0.09
NKX2-1P43699 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-1P43699 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-1P43699 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
NKX2-1P43699 AC060834.1-201ENST00000443027 2032 ntBASIC14.46□□□□□ -0.1
NKX2-1P43699 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-1P43699 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.46□□□□□ -0.1
NKX2-1P43699 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-1P43699 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.46□□□□□ -0.1
NKX2-1P43699 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-1P43699 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX2-1P43699 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX2-1P43699 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-1P43699 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-1P43699 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms