Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.93■□□□□ 0.78
PRPHP41219 AC012615.1-201ENST00000565797 1299 ntBASIC19.93■□□□□ 0.78
PRPHP41219 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PRPHP41219 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.93■□□□□ 0.78
PRPHP41219 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PRPHP41219 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.93■□□□□ 0.78
PRPHP41219 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPHP41219 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPHP41219 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPHP41219 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.92■□□□□ 0.78
PRPHP41219 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PRPHP41219 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPHP41219 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRPHP41219 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 BNIP3P18-201ENST00000593976 575 ntBASIC19.92■□□□□ 0.78
PRPHP41219 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.92■□□□□ 0.78
PRPHP41219 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRPHP41219 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 SIRPAP1-201ENST00000448467 1770 ntBASIC19.92■□□□□ 0.78
PRPHP41219 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPHP41219 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 TP73-AS1-210ENST00000637775 1455 ntBASIC19.92■□□□□ 0.78
PRPHP41219 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPHP41219 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 AL049757.1-201ENST00000616842 1596 ntBASIC19.91■□□□□ 0.78
PRPHP41219 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRPHP41219 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRPHP41219 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PRPHP41219 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PRPHP41219 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 MYCLP1-201ENST00000372451 1075 ntBASIC19.91■□□□□ 0.78
PRPHP41219 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PRPHP41219 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRPHP41219 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPHP41219 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPHP41219 AC092329.2-201ENST00000598402 547 ntBASIC19.91■□□□□ 0.78
PRPHP41219 AL139327.4-201ENST00000612362 153 ntBASIC19.91■□□□□ 0.78
PRPHP41219 AC092119.3-201ENST00000612618 583 ntBASIC19.91■□□□□ 0.78
PRPHP41219 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRPHP41219 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PRPHP41219 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.91■□□□□ 0.78
PRPHP41219 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRPHP41219 LYSMD4-203ENST00000378904 2122 ntBASIC19.91■□□□□ 0.78
PRPHP41219 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPHP41219 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
PRPHP41219 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.9■□□□□ 0.78
PRPHP41219 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PRPHP41219 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.9■□□□□ 0.78
PRPHP41219 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.9■□□□□ 0.78
PRPHP41219 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.9■□□□□ 0.78
PRPHP41219 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.9■□□□□ 0.78
PRPHP41219 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.9■□□□□ 0.78
PRPHP41219 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PRPHP41219 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.9■□□□□ 0.78
PRPHP41219 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRPHP41219 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms