Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.75■□□□□ 0.43
MDH1P40925 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
MDH1P40925 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.75■□□□□ 0.43
MDH1P40925 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MDH1P40925 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 AC024909.3-201ENST00000611513 2257 ntBASIC17.74■□□□□ 0.43
MDH1P40925 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.74■□□□□ 0.43
MDH1P40925 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
MDH1P40925 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.74■□□□□ 0.43
MDH1P40925 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.74■□□□□ 0.43
MDH1P40925 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.74■□□□□ 0.43
MDH1P40925 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
MDH1P40925 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.74■□□□□ 0.43
MDH1P40925 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MDH1P40925 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MDH1P40925 NIFKP9-201ENST00000419265 221 ntBASIC17.73■□□□□ 0.43
MDH1P40925 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 KRT16P5-201ENST00000455284 522 ntBASIC17.73■□□□□ 0.43
MDH1P40925 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.73■□□□□ 0.43
MDH1P40925 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.73■□□□□ 0.43
MDH1P40925 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.73■□□□□ 0.43
MDH1P40925 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MDH1P40925 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MDH1P40925 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MDH1P40925 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.72■□□□□ 0.43
MDH1P40925 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.72■□□□□ 0.43
MDH1P40925 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MDH1P40925 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.72■□□□□ 0.43
MDH1P40925 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MDH1P40925 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.72■□□□□ 0.43
MDH1P40925 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MDH1P40925 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms