Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HTR1AP08908 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.13■□□□□ 0.17
HTR1AP08908 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR1AP08908 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR1AP08908 C1QBPP2-201ENST00000528754 825 ntBASIC16.13■□□□□ 0.17
HTR1AP08908 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR1AP08908 KRT18P6-201ENST00000555540 1265 ntBASIC16.13■□□□□ 0.17
HTR1AP08908 AF186192.3-201ENST00000583427 947 ntBASIC16.13■□□□□ 0.17
HTR1AP08908 AC006058.3-201ENST00000606217 1069 ntBASIC16.13■□□□□ 0.17
HTR1AP08908 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 FSCN1P1-201ENST00000568912 1481 ntBASIC16.13■□□□□ 0.17
HTR1AP08908 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR1AP08908 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HTR1AP08908 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HTR1AP08908 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR1AP08908 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR1AP08908 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1AP08908 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HTR1AP08908 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.12■□□□□ 0.17
HTR1AP08908 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 AP000692.2-201ENST00000608391 879 ntBASIC16.12■□□□□ 0.17
HTR1AP08908 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
HTR1AP08908 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1AP08908 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HTR1AP08908 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HTR1AP08908 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1AP08908 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1AP08908 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR1AP08908 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1AP08908 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 RARRES2P10-201ENST00000564312 460 ntBASIC16.11■□□□□ 0.17
HTR1AP08908 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1AP08908 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1AP08908 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms