Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 LAGE3P1-201ENST00000425356 484 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 MIR3687-2-201ENST00000577708 61 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 MIR3687-1-201ENST00000614492 61 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 AC099343.3-201ENST00000605834 2503 ntBASIC17.5■□□□□ 0.39
PCDHGA12O60330 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA12O60330 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA12O60330 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 YBX2P1-201ENST00000394192 760 ntBASIC17.49■□□□□ 0.39
PCDHGA12O60330 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 AC010327.4-202ENST00000591484 748 ntBASIC17.49■□□□□ 0.39
PCDHGA12O60330 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 AC079781.4-201ENST00000641908 219 ntBASIC17.49■□□□□ 0.39
PCDHGA12O60330 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA12O60330 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA12O60330 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 AC097374.2-201ENST00000618617 1306 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 RNA5SP416-201ENST00000516838 111 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 UNC93B6-202ENST00000528242 690 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 AP001160.2-201ENST00000596071 487 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.48■□□□□ 0.39
PCDHGA12O60330 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA12O60330 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA12O60330 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms