Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
COCHO43405 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.19■□□□□ 0.5
COCHO43405 POLD2P1-201ENST00000511220 997 ntBASIC18.19■□□□□ 0.5
COCHO43405 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.19■□□□□ 0.5
COCHO43405 UNC93B6-202ENST00000528242 690 ntBASIC18.19■□□□□ 0.5
COCHO43405 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 AC034105.1-201ENST00000563488 319 ntBASIC18.19■□□□□ 0.5
COCHO43405 Z83851.2-201ENST00000609564 659 ntBASIC18.19■□□□□ 0.5
COCHO43405 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.19■□□□□ 0.5
COCHO43405 AC004706.3-202ENST00000621574 984 ntBASIC18.19■□□□□ 0.5
COCHO43405 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.19■□□□□ 0.5
COCHO43405 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COCHO43405 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COCHO43405 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.18■□□□□ 0.5
COCHO43405 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 NCF1C-201ENST00000438382 1427 ntBASIC18.18■□□□□ 0.5
COCHO43405 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 MIR940-201ENST00000401276 94 ntBASIC18.18■□□□□ 0.5
COCHO43405 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.18■□□□□ 0.5
COCHO43405 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.18■□□□□ 0.5
COCHO43405 MIR1199-201ENST00000621445 119 ntBASIC18.18■□□□□ 0.5
COCHO43405 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COCHO43405 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COCHO43405 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COCHO43405 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.17■□□□□ 0.5
COCHO43405 AC136632.2-201ENST00000512891 861 ntBASIC18.17■□□□□ 0.5
COCHO43405 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 AC023511.2-201ENST00000618803 211 ntBASIC18.17■□□□□ 0.5
COCHO43405 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 NEFHP1-201ENST00000412845 2629 ntBASIC18.17■□□□□ 0.5
COCHO43405 AC006504.4-201ENST00000592118 1568 ntBASIC18.17■□□□□ 0.5
COCHO43405 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
COCHO43405 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COCHO43405 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COCHO43405 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 AC012317.2-201ENST00000623305 2251 ntBASIC18.16■□□□□ 0.5
COCHO43405 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
COCHO43405 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.16■□□□□ 0.5
COCHO43405 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COCHO43405 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
COCHO43405 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms