Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 MIR1199-201ENST00000621445 119 ntBASIC25.94■■□□□ 1.74
HFM1A2PYH4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HFM1A2PYH4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.94■■□□□ 1.74
HFM1A2PYH4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AC068880.1-201ENST00000507289 2297 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AL590787.1-201ENST00000568856 1315 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
HFM1A2PYH4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
HFM1A2PYH4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AC108073.2-201ENST00000464002 357 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 RPS15P9-201ENST00000494093 319 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AC008667.4-201ENST00000607370 168 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
HFM1A2PYH4 AC139530.3-201ENST00000620344 690 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 PGM5P2-202ENST00000637225 1043 ntBASIC25.93■■□□□ 1.74
HFM1A2PYH4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
HFM1A2PYH4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 IGHV3-65-201ENST00000523210 341 ntBASIC25.92■■□□□ 1.74
HFM1A2PYH4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
HFM1A2PYH4 AL138688.1-201ENST00000624851 1594 ntBASIC25.92■■□□□ 1.74
HFM1A2PYH4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
HFM1A2PYH4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 AC108751.1-201ENST00000490852 363 ntBASIC25.91■■□□□ 1.74
HFM1A2PYH4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HFM1A2PYH4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC25.91■■□□□ 1.74
HFM1A2PYH4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
HFM1A2PYH4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HFM1A2PYH4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC25.89■■□□□ 1.74
HFM1A2PYH4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 AP002414.1-201ENST00000391405 1147 ntBASIC25.89■■□□□ 1.74
HFM1A2PYH4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC25.89■■□□□ 1.74
HFM1A2PYH4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC25.89■■□□□ 1.74
HFM1A2PYH4 TERC-201ENST00000602385 541 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms