Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 HBZP1-201ENST00000354915 429 ntBASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 KRT18P38-201ENST00000449496 1282 ntBASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 DUX4L26-201ENST00000489078 1255 ntBASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 AC063952.2-201ENST00000498792 1227 ntBASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 GPR32P1-201ENST00000601788 811 ntBASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TRGV4A0A0C4DH28 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AC026471.1-201ENST00000564629 3026 ntBASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 RCN1P1-201ENST00000400413 996 ntBASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AL671277.2-201ENST00000458060 996 ntBASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
TRGV4A0A0C4DH28 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRGV4A0A0C4DH28 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 AL353692.3-201ENST00000407031 1396 ntBASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRGV4A0A0C4DH28 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms