Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 MIR1233-2-201ENST00000408138 82 ntBASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 MIR1233-1-201ENST00000408722 82 ntBASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 ELK2BP-201ENST00000415014 1224 ntBASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 AC108751.1-201ENST00000490852 363 ntBASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV19A0A0A6YYK7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 AC007967.2-201ENST00000432613 625 ntBASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 AC009336.1-201ENST00000608941 1553 ntBASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV19A0A0A6YYK7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AC006504.4-201ENST00000592118 1568 ntBASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AL139424.1-201ENST00000607572 797 ntBASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV19A0A0A6YYK7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV19A0A0A6YYK7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms