Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX49Q9Y6V7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 AL391807.1-203ENST00000604392 2365 ntBASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX49Q9Y6V7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 MIR3917-201ENST00000580971 93 ntBASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 AP001094.4-201ENST00000579008 2176 ntBASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX49Q9Y6V7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 AL109659.2-201ENST00000606809 1674 ntBASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX49Q9Y6V7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms