Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 AC004835.2-201ENST00000603762 682 ntBASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 AC092902.6-201ENST00000641783 218 ntBASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 PI4KAP1-204ENST00000612579 1703 ntBASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 AC004461.1-201ENST00000412461 403 ntBASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC2Q9Y5Z7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AP000974.1-201ENST00000623909 2387 ntBASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AL035633.1-201ENST00000406139 838 ntBASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 DDX43P3-201ENST00000441064 443 ntBASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 CXCL1P1-201ENST00000502804 216 ntBASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AC004449.1-201ENST00000564240 433 ntBASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC2Q9Y5Z7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HCFC2Q9Y5Z7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC2Q9Y5Z7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms