Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HRH3Q9Y5N1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 BNIP3P18-201ENST00000593976 575 ntBASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 AL121912.1-201ENST00000603683 238 ntBASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HRH3Q9Y5N1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HRH3Q9Y5N1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HRH3Q9Y5N1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HRH3Q9Y5N1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HRH3Q9Y5N1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.33■□□□□ 0.21
HRH3Q9Y5N1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 AC106795.1-205ENST00000512851 1056 ntBASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 DUTP2-201ENST00000519164 463 ntBASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 AF238378.1-201ENST00000526806 358 ntBASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HRH3Q9Y5N1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms