Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 IGHV3-52-201ENST00000519770 353 ntBASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 AL732292.2-201ENST00000609649 430 ntBASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHA4Q9UN74 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 AC091304.2-201ENST00000564639 760 ntBASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 AC111152.3-201ENST00000569699 673 ntBASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 AL138688.1-201ENST00000624851 1594 ntBASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHA4Q9UN74 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
PCDHA4Q9UN74 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
PCDHA4Q9UN74 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 MYCLP1-201ENST00000372451 1075 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 ABCD1P5-201ENST00000445663 754 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AC132008.2-207ENST00000454517 770 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AL139327.4-201ENST00000612362 153 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 AP000867.4-201ENST00000641616 219 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 BCL2-203ENST00000589955 5011 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 LYSMD4-203ENST00000378904 2122 ntBASIC20.14■□□□□ 0.81
PCDHA4Q9UN74 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms